Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Gm12058-201ENSMUST00000118614 437 ntBASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Gm25043-201ENSMUST00000158604 212 ntBASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Gm44405-201ENSMUST00000198952 126 ntBASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Gm44262-201ENSMUST00000204969 372 ntBASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx55Q6ZPL9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx55Q6ZPL9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx55Q6ZPL9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.96□□□□□ -0.02
Ddx55Q6ZPL9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx55Q6ZPL9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Gm22334-201ENSMUST00000158070 133 ntBASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Gm25700-201ENSMUST00000177693 110 ntBASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx55Q6ZPL9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ddx55Q6ZPL9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms