Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup98Q6PFD9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Gm14028-201ENSMUST00000117434 479 ntBASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nup98Q6PFD9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm13813-201ENSMUST00000120998 787 ntBASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm24990-201ENSMUST00000157406 323 ntBASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Mir6927-201ENSMUST00000184494 71 ntBASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm8712-201ENSMUST00000221090 701 ntBASIC15.31■□□□□ 0.04
Nup98Q6PFD9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup98Q6PFD9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms