Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Gm7230-201ENSMUST00000173026 815 ntBASIC14.08□□□□□ -0.16
CtifQ6PEE2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.08□□□□□ -0.16
CtifQ6PEE2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.08□□□□□ -0.16
CtifQ6PEE2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.07□□□□□ -0.16
CtifQ6PEE2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm11779-201ENSMUST00000118541 368 ntBASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm13823-201ENSMUST00000119930 345 ntBASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm15467-201ENSMUST00000120582 445 ntBASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Gm5186-201ENSMUST00000218781 920 ntBASIC14.07□□□□□ -0.16
CtifQ6PEE2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.07□□□□□ -0.16
CtifQ6PEE2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CtifQ6PEE2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CtifQ6PEE2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm27390-201ENSMUST00000184516 176 ntBASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.06□□□□□ -0.16
CtifQ6PEE2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms