Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85bQ6PDY0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85bQ6PDY0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc85bQ6PDY0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85bQ6PDY0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm16479-201ENSMUST00000121706 932 ntBASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm13316-201ENSMUST00000140537 691 ntBASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm26185-201ENSMUST00000157692 266 ntBASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm44262-201ENSMUST00000204969 372 ntBASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85bQ6PDY0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85bQ6PDY0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm12403-201ENSMUST00000121384 959 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm8738-201ENSMUST00000172606 329 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm43058-201ENSMUST00000197645 625 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm44545-201ENSMUST00000208262 746 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Gm8385-201ENSMUST00000058999 643 ntBASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85bQ6PDY0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Snord83b-201ENSMUST00000104546 94 ntBASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Gm12363-201ENSMUST00000122250 668 ntBASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85bQ6PDY0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms