Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Gm13453-201ENSMUST00000118708 357 ntBASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Smarcd3Q6P9Z1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smarcd3Q6P9Z1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Gm13616-201ENSMUST00000120600 222 ntBASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd3Q6P9Z1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm4875-201ENSMUST00000118257 786 ntBASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Gm44872-201ENSMUST00000207864 420 ntBASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms