Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Gm2445-201ENSMUST00000182798 989 ntBASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Gm27331-201ENSMUST00000183705 60 ntBASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb4Q6P8W9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm5187-201ENSMUST00000117317 991 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm12203-201ENSMUST00000118235 598 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm12209-201ENSMUST00000120089 596 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm17330-201ENSMUST00000221047 165 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm26315-201ENSMUST00000083890 321 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hmgb4Q6P8W9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Gm23931-201ENSMUST00000103842 109 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms