Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.97□□□□□ -0.17
Scube3Q66PY1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Gm25318-201ENSMUST00000122554 314 ntBASIC13.97□□□□□ -0.17
Scube3Q66PY1 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Proscos-202ENSMUST00000178990 666 ntBASIC13.97□□□□□ -0.17
Scube3Q66PY1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scube3Q66PY1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scube3Q66PY1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm14350-201ENSMUST00000116642 640 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm11803-201ENSMUST00000119966 444 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm18595-201ENSMUST00000175736 1068 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm27847-201ENSMUST00000183711 107 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm27375-201ENSMUST00000183799 107 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm28923-201ENSMUST00000187755 322 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Gm7561-201ENSMUST00000211203 886 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 AC102542.1-201ENSMUST00000225204 1138 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.96□□□□□ -0.17
Scube3Q66PY1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scube3Q66PY1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.96□□□□□ -0.17
Scube3Q66PY1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scube3Q66PY1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scube3Q66PY1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scube3Q66PY1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.96□□□□□ -0.18
Scube3Q66PY1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scube3Q66PY1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Scube3Q66PY1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scube3Q66PY1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Gm14126-201ENSMUST00000122345 395 ntBASIC13.95□□□□□ -0.18
Scube3Q66PY1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Gm8810-201ENSMUST00000172895 754 ntBASIC13.95□□□□□ -0.18
Scube3Q66PY1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scube3Q66PY1 Gm45841-201ENSMUST00000207700 164 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms