Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.21□□□□□ -0.45
AtmQ62388 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AtmQ62388 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.21□□□□□ -0.46
AtmQ62388 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
AtmQ62388 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.21□□□□□ -0.46
AtmQ62388 Gm14832-201ENSMUST00000121289 322 ntBASIC12.21□□□□□ -0.46
AtmQ62388 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.21□□□□□ -0.46
AtmQ62388 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.21□□□□□ -0.46
AtmQ62388 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
AtmQ62388 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.21□□□□□ -0.46
AtmQ62388 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
AtmQ62388 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
AtmQ62388 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AtmQ62388 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.2□□□□□ -0.46
AtmQ62388 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Mir671-201ENSMUST00000102432 98 ntBASIC12.2□□□□□ -0.46
AtmQ62388 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.2□□□□□ -0.46
AtmQ62388 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.2□□□□□ -0.46
AtmQ62388 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.2□□□□□ -0.46
AtmQ62388 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.2□□□□□ -0.46
AtmQ62388 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.2□□□□□ -0.46
AtmQ62388 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.2□□□□□ -0.46
AtmQ62388 Gm38092-201ENSMUST00000195600 653 ntBASIC12.2□□□□□ -0.46
AtmQ62388 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.2□□□□□ -0.46
AtmQ62388 Gm9996-201ENSMUST00000070359 913 ntBASIC12.2□□□□□ -0.46
AtmQ62388 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.2□□□□□ -0.46
AtmQ62388 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AtmQ62388 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Mir6923-201ENSMUST00000184592 72 ntBASIC12.19□□□□□ -0.46
AtmQ62388 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Mt1-202ENSMUST00000211807 1085 ntBASIC12.19□□□□□ -0.46
AtmQ62388 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.19□□□□□ -0.46
AtmQ62388 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
AtmQ62388 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.19□□□□□ -0.46
AtmQ62388 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.19□□□□□ -0.46
AtmQ62388 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Gm8584-201ENSMUST00000171982 758 ntBASIC12.19□□□□□ -0.46
AtmQ62388 Gm32999-201ENSMUST00000192693 562 ntBASIC12.19□□□□□ -0.46
AtmQ62388 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
AtmQ62388 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AtmQ62388 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
AtmQ62388 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.18□□□□□ -0.46
AtmQ62388 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AtmQ62388 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
AtmQ62388 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AtmQ62388 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms