Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.12□□□□□ -0.63
SspnQ62147 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SspnQ62147 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SspnQ62147 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SspnQ62147 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SspnQ62147 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.11□□□□□ -0.63
SspnQ62147 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.11□□□□□ -0.63
SspnQ62147 Gm9522-201ENSMUST00000182394 926 ntBASIC11.11□□□□□ -0.63
SspnQ62147 Gm27989-201ENSMUST00000184721 107 ntBASIC11.11□□□□□ -0.63
SspnQ62147 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.11□□□□□ -0.63
SspnQ62147 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SspnQ62147 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SspnQ62147 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SspnQ62147 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SspnQ62147 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Gm18041-201ENSMUST00000218210 618 ntBASIC11.1□□□□□ -0.63
SspnQ62147 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.1□□□□□ -0.63
SspnQ62147 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gm5867-201ENSMUST00000063197 592 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.1□□□□□ -0.63
SspnQ62147 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SspnQ62147 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SspnQ62147 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.09□□□□□ -0.63
SspnQ62147 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms