Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ecm1Q61508 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ecm1Q61508 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.54□□□□□ -0.08
Ecm1Q61508 Gm11439-201ENSMUST00000118598 409 ntBASIC14.54□□□□□ -0.08
Ecm1Q61508 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Gm43138-201ENSMUST00000199123 708 ntBASIC14.54□□□□□ -0.08
Ecm1Q61508 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.54□□□□□ -0.08
Ecm1Q61508 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.54□□□□□ -0.08
Ecm1Q61508 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.54□□□□□ -0.08
Ecm1Q61508 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.54□□□□□ -0.08
Ecm1Q61508 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ecm1Q61508 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm14130-201ENSMUST00000118417 987 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm15547-201ENSMUST00000122152 333 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm23363-201ENSMUST00000175024 79 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm27341-201ENSMUST00000183570 106 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm8885-201ENSMUST00000189382 598 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Nsd1-205ENSMUST00000224693 852 ntBASIC14.53□□□□□ -0.08
Ecm1Q61508 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ecm1Q61508 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ecm1Q61508 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ecm1Q61508 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ecm1Q61508 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.52□□□□□ -0.08
Ecm1Q61508 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.52□□□□□ -0.08
Ecm1Q61508 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ecm1Q61508 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Ecm1Q61508 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Ecm1Q61508 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ecm1Q61508 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ecm1Q61508 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms