Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm11637-201ENSMUST00000120601 592 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm19931-201ENSMUST00000198920 368 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm10268-201ENSMUST00000085340 555 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm12742-201ENSMUST00000117326 410 ntBASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm12957-201ENSMUST00000117835 377 ntBASIC13.75□□□□□ -0.21
Smarcd1Q61466 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm16479-201ENSMUST00000121706 932 ntBASIC13.75□□□□□ -0.21
Smarcd1Q61466 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.75□□□□□ -0.21
Smarcd1Q61466 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd1Q61466 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.74□□□□□ -0.21
Smarcd1Q61466 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.74□□□□□ -0.21
Smarcd1Q61466 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.74□□□□□ -0.21
Smarcd1Q61466 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Gm7029-201ENSMUST00000173226 450 ntBASIC13.74□□□□□ -0.21
Smarcd1Q61466 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms