Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vsx2Q61412 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vsx2Q61412 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.9□□□□□ -0.34
Vsx2Q61412 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Gm11478-201ENSMUST00000117851 599 ntBASIC12.9□□□□□ -0.34
Vsx2Q61412 Gm13689-201ENSMUST00000119360 685 ntBASIC12.9□□□□□ -0.34
Vsx2Q61412 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vsx2Q61412 Gm5161-201ENSMUST00000075243 853 ntBASIC12.9□□□□□ -0.34
Vsx2Q61412 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx2Q61412 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vsx2Q61412 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.9□□□□□ -0.35
Vsx2Q61412 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.89□□□□□ -0.35
Vsx2Q61412 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.89□□□□□ -0.35
Vsx2Q61412 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Gm15429-201ENSMUST00000151268 798 ntBASIC12.89□□□□□ -0.35
Vsx2Q61412 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.89□□□□□ -0.35
Vsx2Q61412 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.89□□□□□ -0.35
Vsx2Q61412 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
Vsx2Q61412 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms