Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a1Q61245 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.49□□□□□ -0.09
Col11a1Q61245 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm42937-201ENSMUST00000197360 752 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm11675-201ENSMUST00000121873 832 ntBASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col11a1Q61245 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a1Q61245 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm23251-201ENSMUST00000103773 110 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm10076-201ENSMUST00000073238 384 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col11a1Q61245 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.47□□□□□ -0.09
Col11a1Q61245 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Col11a1Q61245 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col11a1Q61245 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.46□□□□□ -0.09
Col11a1Q61245 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Gm9230-201ENSMUST00000188228 532 ntBASIC14.46□□□□□ -0.09
Col11a1Q61245 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms