Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Gm22331-201ENSMUST00000158066 136 ntBASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfaip3Q60769 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfaip3Q60769 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm11425-201ENSMUST00000119608 498 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm29127-201ENSMUST00000188304 517 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm9396-201ENSMUST00000076703 567 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfaip3Q60769 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms