Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Gm44999-201ENSMUST00000207456 1493 ntBASIC17.57■□□□□ 0.4
Atf3Q60765 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Atf3Q60765 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC17.57■□□□□ 0.4
Atf3Q60765 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Gm16397-201ENSMUST00000122201 494 ntBASIC17.57■□□□□ 0.4
Atf3Q60765 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Atf3Q60765 Gm23363-201ENSMUST00000175024 79 ntBASIC17.57■□□□□ 0.4
Atf3Q60765 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC17.57■□□□□ 0.4
Atf3Q60765 AC154849.4-201ENSMUST00000224868 365 ntBASIC17.57■□□□□ 0.4
Atf3Q60765 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Atf3Q60765 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.57■□□□□ 0.4
Atf3Q60765 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf3Q60765 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atf3Q60765 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.56■□□□□ 0.4
Atf3Q60765 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC17.56■□□□□ 0.4
Atf3Q60765 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atf3Q60765 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf3Q60765 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC17.55■□□□□ 0.4
Atf3Q60765 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atf3Q60765 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Atf3Q60765 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atf3Q60765 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Gm13888-201ENSMUST00000119148 422 ntBASIC17.55■□□□□ 0.4
Atf3Q60765 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC17.55■□□□□ 0.4
Atf3Q60765 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atf3Q60765 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.55■□□□□ 0.4
Atf3Q60765 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC17.55■□□□□ 0.4
Atf3Q60765 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC17.55■□□□□ 0.4
Atf3Q60765 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC17.55■□□□□ 0.4
Atf3Q60765 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf3Q60765 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Atf3Q60765 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC17.54■□□□□ 0.4
Atf3Q60765 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Atf3Q60765 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm19353-201ENSMUST00000184561 445 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm29615-201ENSMUST00000185371 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28224-201ENSMUST00000186078 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm29001-201ENSMUST00000186177 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28292-201ENSMUST00000186593 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28101-201ENSMUST00000187608 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm29076-201ENSMUST00000187689 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28302-201ENSMUST00000187931 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28646-201ENSMUST00000188220 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28205-201ENSMUST00000189177 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm29032-201ENSMUST00000189797 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28695-201ENSMUST00000190300 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 Gm37448-201ENSMUST00000192795 697 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Gm7600-201ENSMUST00000209657 785 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.54■□□□□ 0.4
Atf3Q60765 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms