Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
ClpbQ60649 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ClpbQ60649 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
ClpbQ60649 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ClpbQ60649 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.71□□□□□ -0.37
ClpbQ60649 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.71□□□□□ -0.37
ClpbQ60649 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ClpbQ60649 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ClpbQ60649 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.71□□□□□ -0.37
ClpbQ60649 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClpbQ60649 Gm38223-201ENSMUST00000194484 695 ntBASIC12.71□□□□□ -0.37
ClpbQ60649 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ClpbQ60649 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClpbQ60649 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.71□□□□□ -0.37
ClpbQ60649 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ClpbQ60649 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClpbQ60649 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ClpbQ60649 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ClpbQ60649 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.7□□□□□ -0.38
ClpbQ60649 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.7□□□□□ -0.38
ClpbQ60649 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.7□□□□□ -0.38
ClpbQ60649 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm5161-201ENSMUST00000075243 853 ntBASIC12.7□□□□□ -0.38
ClpbQ60649 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.7□□□□□ -0.38
ClpbQ60649 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.7□□□□□ -0.38
ClpbQ60649 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ClpbQ60649 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms