Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Gm24543-201ENSMUST00000103867 82 ntBASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Gm13223-201ENSMUST00000118609 747 ntBASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Gm8872-201ENSMUST00000197475 1341 ntBASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tsr1Q5SWD9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm14767-201ENSMUST00000121559 586 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm27533-201ENSMUST00000183800 152 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 CT025525.2-201ENSMUST00000227743 423 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsr1Q5SWD9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tsr1Q5SWD9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tsr1Q5SWD9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tsr1Q5SWD9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tsr1Q5SWD9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tsr1Q5SWD9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Gm24380-201ENSMUST00000122696 324 ntBASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Gm26736-201ENSMUST00000180425 1236 ntBASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Gm27306-201ENSMUST00000183970 107 ntBASIC14.33□□□□□ -0.12
Tsr1Q5SWD9 Gm37533-201ENSMUST00000193848 545 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms