Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Gm42550-201ENSMUST00000201553 960 ntBASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Gm19220-201ENSMUST00000222682 803 ntBASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5d-4Q5R1F6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Mir6977-201ENSMUST00000184960 64 ntBASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm45841-201ENSMUST00000207700 164 ntBASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm2423-201ENSMUST00000074863 733 ntBASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav5d-4Q5R1F6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms