Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Matn2-203ENSMUST00000226766 3252 ntBASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm15653-201ENSMUST00000119247 907 ntBASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm18889-201ENSMUST00000174284 929 ntBASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms