Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf38aQ4FK66 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Gm11591-201ENSMUST00000120063 702 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Gm12363-201ENSMUST00000122250 668 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Gm42627-201ENSMUST00000197347 224 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Gm43133-201ENSMUST00000197472 463 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38aQ4FK66 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Mir1247-201ENSMUST00000116706 82 ntBASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Mir7221-201ENSMUST00000184009 72 ntBASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Gm43179-201ENSMUST00000198797 275 ntBASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38aQ4FK66 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Gm27501-201ENSMUST00000183599 107 ntBASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Olfr582-201ENSMUST00000098212 960 ntBASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38aQ4FK66 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf38aQ4FK66 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms