Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm18038-201ENSMUST00000197900 485 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm5257-201ENSMUST00000121823 790 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm5904-201ENSMUST00000210286 865 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Spg11Q3UHA3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm28071-201ENSMUST00000190355 478 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm13549-201ENSMUST00000118339 796 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm2445-201ENSMUST00000182798 989 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm17827-201ENSMUST00000211825 742 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Gm19009-201ENSMUST00000223072 823 ntBASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Spg11Q3UHA3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms