Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Q3U1D9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.48□□□□□ -0.57
Q3U1D9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm23931-201ENSMUST00000103842 109 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Q3U1D9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Gm11637-201ENSMUST00000120601 592 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.48□□□□□ -0.57
Q3U1D9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm37008-201ENSMUST00000195712 319 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm7399-201ENSMUST00000032395 858 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Q3U1D9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Matn2-206ENSMUST00000228570 2798 ntBASIC11.48□□□□□ -0.57
Q3U1D9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Q3U1D9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Q3U1D9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.47□□□□□ -0.57
Q3U1D9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.47□□□□□ -0.57
Q3U1D9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.47□□□□□ -0.57
Q3U1D9 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.47□□□□□ -0.57
Q3U1D9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Q3U1D9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.47□□□□□ -0.57
Q3U1D9 Gm26185-201ENSMUST00000157692 266 ntBASIC11.47□□□□□ -0.57
Q3U1D9 Gm16379-201ENSMUST00000161469 348 ntBASIC11.47□□□□□ -0.57
Q3U1D9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.47□□□□□ -0.57
Q3U1D9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Q3U1D9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Q3U1D9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 411.5 ms