Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Gm27306-201ENSMUST00000183970 107 ntBASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Gm9063-201ENSMUST00000223299 582 ntBASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm21470-201ENSMUST00000187680 696 ntBASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm43703-201ENSMUST00000200523 763 ntBASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm7775-201ENSMUST00000218871 853 ntBASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Fndc4Q3TR08 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms