Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cul4aQ3TCH7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.9□□□□□ -0.18
Cul4aQ3TCH7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.9□□□□□ -0.18
Cul4aQ3TCH7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cul4aQ3TCH7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cul4aQ3TCH7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cul4aQ3TCH7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.9□□□□□ -0.19
Cul4aQ3TCH7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cul4aQ3TCH7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Gm27838-201ENSMUST00000184829 128 ntBASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cul4aQ3TCH7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cul4aQ3TCH7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cul4aQ3TCH7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms