Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm25766-201ENSMUST00000104101 131 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm43547-201ENSMUST00000197729 328 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm10169-201ENSMUST00000121822 348 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm9072-201ENSMUST00000218390 1514 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm25677-201ENSMUST00000174983 72 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm27956-201ENSMUST00000175604 260 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm18798-201ENSMUST00000187264 1700 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm43506-201ENSMUST00000200675 753 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm14193-201ENSMUST00000105067 153 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm8731-201ENSMUST00000118088 412 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm8384-201ENSMUST00000190905 704 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm3635-201ENSMUST00000212314 354 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 AC153954.1-201ENSMUST00000216959 255 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 AC154305.4-201ENSMUST00000224520 614 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm11500-201ENSMUST00000118237 601 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm13204-201ENSMUST00000120110 821 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm29543-201ENSMUST00000188138 967 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm8342-201ENSMUST00000209839 757 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Hivep3-201ENSMUST00000084306 2973 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms