Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptchd3Q0EEE2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptchd3Q0EEE2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptchd3Q0EEE2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptchd3Q0EEE2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Mir698-201ENSMUST00000102164 109 ntBASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptchd3Q0EEE2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ptchd3Q0EEE2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptchd3Q0EEE2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Gm15393-201ENSMUST00000120499 219 ntBASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Gm27680-201ENSMUST00000184192 160 ntBASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Gm21470-201ENSMUST00000187680 696 ntBASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.76□□□□□ -0.37
Ptchd3Q0EEE2 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms