Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Gm15770-201ENSMUST00000117498 584 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 Gm11793-201ENSMUST00000120433 981 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.41□□□□□ -0.26
Ebf1Q07802 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ebf1Q07802 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf1Q07802 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.4□□□□□ -0.26
Ebf1Q07802 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.4□□□□□ -0.26
Ebf1Q07802 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.4□□□□□ -0.26
Ebf1Q07802 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm18827-201ENSMUST00000188341 790 ntBASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm18935-201ENSMUST00000212692 664 ntBASIC13.4□□□□□ -0.26
Ebf1Q07802 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.4□□□□□ -0.26
Ebf1Q07802 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf1Q07802 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ebf1Q07802 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Ebf1Q07802 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms