Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm29649-201ENSMUST00000185649 419 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm44069-201ENSMUST00000204898 506 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox4Q06831 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Sox4Q06831 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Sox4Q06831 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox4Q06831 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13□□□□□ -0.33
Sox4Q06831 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13□□□□□ -0.33
Sox4Q06831 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13□□□□□ -0.33
Sox4Q06831 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox4Q06831 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox4Q06831 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sox4Q06831 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.99□□□□□ -0.33
Sox4Q06831 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sox4Q06831 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox4Q06831 Gm11618-201ENSMUST00000117946 267 ntBASIC12.99□□□□□ -0.33
Sox4Q06831 Gm13369-201ENSMUST00000119442 987 ntBASIC12.99□□□□□ -0.33
Sox4Q06831 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.99□□□□□ -0.33
Sox4Q06831 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox4Q06831 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox4Q06831 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox4Q06831 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.99□□□□□ -0.33
Sox4Q06831 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms