Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.82□□□□□ -0.36
Msx2Q03358 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx2Q03358 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx2Q03358 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx2Q03358 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Msx2Q03358 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Gm4995-201ENSMUST00000117247 432 ntBASIC12.82□□□□□ -0.36
Msx2Q03358 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.82□□□□□ -0.36
Msx2Q03358 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.82□□□□□ -0.36
Msx2Q03358 Mir6990-201ENSMUST00000183724 91 ntBASIC12.82□□□□□ -0.36
Msx2Q03358 Shd-206ENSMUST00000225145 998 ntBASIC12.82□□□□□ -0.36
Msx2Q03358 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.82□□□□□ -0.36
Msx2Q03358 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Msx2Q03358 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx2Q03358 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msx2Q03358 Gm6912-201ENSMUST00000117218 544 ntBASIC12.81□□□□□ -0.36
Msx2Q03358 Gm15770-201ENSMUST00000117498 584 ntBASIC12.81□□□□□ -0.36
Msx2Q03358 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx2Q03358 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msx2Q03358 Gm44335-201ENSMUST00000196879 141 ntBASIC12.81□□□□□ -0.36
Msx2Q03358 Gm44297-201ENSMUST00000198304 141 ntBASIC12.81□□□□□ -0.36
Msx2Q03358 Gm44346-201ENSMUST00000198851 141 ntBASIC12.81□□□□□ -0.36
Msx2Q03358 Gm18206-201ENSMUST00000207027 926 ntBASIC12.81□□□□□ -0.36
Msx2Q03358 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Msx2Q03358 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx2Q03358 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx2Q03358 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx2Q03358 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msx2Q03358 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Msx2Q03358 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.8□□□□□ -0.36
Msx2Q03358 Gm25287-201ENSMUST00000103846 110 ntBASIC12.8□□□□□ -0.36
Msx2Q03358 Gm22918-201ENSMUST00000103855 110 ntBASIC12.8□□□□□ -0.36
Msx2Q03358 Mir874-201ENSMUST00000104769 76 ntBASIC12.8□□□□□ -0.36
Msx2Q03358 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Msx2Q03358 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.8□□□□□ -0.36
Msx2Q03358 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.8□□□□□ -0.36
Msx2Q03358 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.8□□□□□ -0.36
Msx2Q03358 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.8□□□□□ -0.36
Msx2Q03358 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Msx2Q03358 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.8□□□□□ -0.36
Msx2Q03358 Gm15823-201ENSMUST00000064305 670 ntBASIC12.8□□□□□ -0.36
Msx2Q03358 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx2Q03358 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms