Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Gm11964-201ENSMUST00000120982 444 ntBASIC11.29□□□□□ -0.6
Col8a1Q00780 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.29□□□□□ -0.6
Col8a1Q00780 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.29□□□□□ -0.6
Col8a1Q00780 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.29□□□□□ -0.6
Col8a1Q00780 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Gm19208-201ENSMUST00000213861 912 ntBASIC11.29□□□□□ -0.6
Col8a1Q00780 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col8a1Q00780 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a1Q00780 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm18212-201ENSMUST00000211678 889 ntBASIC11.28□□□□□ -0.6
Col8a1Q00780 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.28□□□□□ -0.6
Col8a1Q00780 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Col8a1Q00780 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a1Q00780 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a1Q00780 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a1Q00780 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms