Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.48□□□□□ -0.09
Lig3P97386 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.47□□□□□ -0.09
Lig3P97386 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lig3P97386 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.47□□□□□ -0.09
Lig3P97386 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.47□□□□□ -0.09
Lig3P97386 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Lig3P97386 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lig3P97386 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lig3P97386 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.46□□□□□ -0.09
Lig3P97386 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.46□□□□□ -0.09
Lig3P97386 Gm10275-202ENSMUST00000168697 495 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Gm26461-201ENSMUST00000175064 290 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.46□□□□□ -0.09
Lig3P97386 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.46□□□□□ -0.09
Lig3P97386 Gm37466-201ENSMUST00000195692 652 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Gm3961-201ENSMUST00000204425 994 ntBASIC14.46□□□□□ -0.09
Lig3P97386 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Gm10275-201ENSMUST00000092620 635 ntBASIC14.46□□□□□ -0.09
Lig3P97386 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.46□□□□□ -0.09
Lig3P97386 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.46□□□□□ -0.09
Lig3P97386 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lig3P97386 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lig3P97386 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lig3P97386 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lig3P97386 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Lig3P97386 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lig3P97386 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lig3P97386 Pck2-205ENSMUST00000226352 2784 ntBASIC14.45□□□□□ -0.1
Lig3P97386 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.45□□□□□ -0.1
Lig3P97386 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lig3P97386 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.45□□□□□ -0.1
Lig3P97386 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.45□□□□□ -0.1
Lig3P97386 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.45□□□□□ -0.1
Lig3P97386 Gm24196-201ENSMUST00000179161 110 ntBASIC14.45□□□□□ -0.1
Lig3P97386 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.45□□□□□ -0.1
Lig3P97386 Gm43822-201ENSMUST00000200285 476 ntBASIC14.45□□□□□ -0.1
Lig3P97386 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Gm10012-201ENSMUST00000078252 192 ntBASIC14.45□□□□□ -0.1
Lig3P97386 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lig3P97386 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lig3P97386 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lig3P97386 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms