Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43cP86449 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Gm11918-201ENSMUST00000121660 179 ntBASIC14.38□□□□□ -0.11
Trim43cP86449 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim43cP86449 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim43cP86449 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim43cP86449 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim43cP86449 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.38□□□□□ -0.11
Trim43cP86449 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim43cP86449 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim43cP86449 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43cP86449 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.37□□□□□ -0.11
Trim43cP86449 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.37□□□□□ -0.11
Trim43cP86449 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.37□□□□□ -0.11
Trim43cP86449 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim43cP86449 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim43cP86449 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim43cP86449 Gm6244-201ENSMUST00000178732 841 ntBASIC14.37□□□□□ -0.11
Trim43cP86449 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim43cP86449 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim43cP86449 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.37□□□□□ -0.11
Trim43cP86449 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim43cP86449 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim43cP86449 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43cP86449 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim43cP86449 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim43cP86449 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.36□□□□□ -0.11
Trim43cP86449 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.36□□□□□ -0.11
Trim43cP86449 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim43cP86449 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.36□□□□□ -0.11
Trim43cP86449 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.36□□□□□ -0.11
Trim43cP86449 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim43cP86449 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim43cP86449 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.36□□□□□ -0.11
Trim43cP86449 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim43cP86449 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43cP86449 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim43cP86449 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.35□□□□□ -0.11
Trim43cP86449 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms