Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Gm9797-201ENSMUST00000052902 613 ntBASIC13.63□□□□□ -0.23
Trim43bP86448 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trim43bP86448 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.62□□□□□ -0.23
Trim43bP86448 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43bP86448 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43bP86448 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim43bP86448 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim43bP86448 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim43bP86448 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.62□□□□□ -0.23
Trim43bP86448 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43bP86448 Gm28760-201ENSMUST00000185995 736 ntBASIC13.62□□□□□ -0.23
Trim43bP86448 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.62□□□□□ -0.23
Trim43bP86448 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim43bP86448 Gm5186-201ENSMUST00000218781 920 ntBASIC13.62□□□□□ -0.23
Trim43bP86448 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.62□□□□□ -0.23
Trim43bP86448 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43bP86448 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43bP86448 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43bP86448 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim43bP86448 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.61□□□□□ -0.23
Trim43bP86448 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.61□□□□□ -0.23
Trim43bP86448 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim43bP86448 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim43bP86448 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm6218-201ENSMUST00000219812 628 ntBASIC13.61□□□□□ -0.23
Trim43bP86448 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm15823-201ENSMUST00000064305 670 ntBASIC13.61□□□□□ -0.23
Trim43bP86448 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.61□□□□□ -0.23
Trim43bP86448 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim43bP86448 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim43bP86448 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim43bP86448 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim43bP86448 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43bP86448 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim43bP86448 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms