Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.78□□□□□ -0.52
H3f3aP84244 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.78□□□□□ -0.52
H3f3aP84244 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Gm14350-201ENSMUST00000116642 640 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Gm11478-201ENSMUST00000117851 599 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.78□□□□□ -0.52
H3f3aP84244 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.78□□□□□ -0.52
H3f3aP84244 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Gm5035-201ENSMUST00000215581 927 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.78□□□□□ -0.52
H3f3aP84244 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
H3f3aP84244 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
H3f3aP84244 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
H3f3aP84244 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H3f3aP84244 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.77□□□□□ -0.52
H3f3aP84244 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H3f3aP84244 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
H3f3aP84244 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Gm11814-201ENSMUST00000119515 929 ntBASIC11.77□□□□□ -0.53
H3f3aP84244 Gm10156-201ENSMUST00000122364 462 ntBASIC11.77□□□□□ -0.53
H3f3aP84244 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.77□□□□□ -0.53
H3f3aP84244 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
H3f3aP84244 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.77□□□□□ -0.53
H3f3aP84244 Gm8598-201ENSMUST00000221184 836 ntBASIC11.77□□□□□ -0.53
H3f3aP84244 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
H3f3aP84244 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
H3f3aP84244 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H3f3aP84244 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms