Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcgP82348 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcgP82348 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcgP82348 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcgP82348 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.03□□□□□ -0.32
SgcgP82348 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SgcgP82348 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Gm9823-201ENSMUST00000051212 327 ntBASIC13.03□□□□□ -0.32
SgcgP82348 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.03□□□□□ -0.32
SgcgP82348 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcgP82348 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.03□□□□□ -0.32
SgcgP82348 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcgP82348 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcgP82348 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcgP82348 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SgcgP82348 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcgP82348 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcgP82348 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SgcgP82348 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.02□□□□□ -0.33
SgcgP82348 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.02□□□□□ -0.33
SgcgP82348 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.02□□□□□ -0.33
SgcgP82348 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SgcgP82348 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.02□□□□□ -0.33
SgcgP82348 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SgcgP82348 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcgP82348 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.01□□□□□ -0.33
SgcgP82348 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.01□□□□□ -0.33
SgcgP82348 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SgcgP82348 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SgcgP82348 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SgcgP82348 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Gm22018-201ENSMUST00000104357 131 ntBASIC13.01□□□□□ -0.33
SgcgP82348 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SgcgP82348 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.01□□□□□ -0.33
SgcgP82348 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.01□□□□□ -0.33
SgcgP82348 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SgcgP82348 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SgcgP82348 Gm19184-201ENSMUST00000196798 928 ntBASIC13.01□□□□□ -0.33
SgcgP82348 Gm18054-201ENSMUST00000207539 555 ntBASIC13.01□□□□□ -0.33
SgcgP82348 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcgP82348 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms