Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cux2P70298 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cux2P70298 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC21.19■□□□□ 0.98
Cux2P70298 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cux2P70298 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cux2P70298 Gm11892-201ENSMUST00000117711 1202 ntBASIC21.19■□□□□ 0.98
Cux2P70298 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC21.19■□□□□ 0.98
Cux2P70298 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC21.19■□□□□ 0.98
Cux2P70298 Gm17827-201ENSMUST00000211825 742 ntBASIC21.19■□□□□ 0.98
Cux2P70298 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC21.19■□□□□ 0.98
Cux2P70298 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC21.19■□□□□ 0.98
Cux2P70298 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cux2P70298 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC21.18■□□□□ 0.98
Cux2P70298 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC21.18■□□□□ 0.98
Cux2P70298 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cux2P70298 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cux2P70298 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC21.18■□□□□ 0.98
Cux2P70298 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cux2P70298 Gm25072-201ENSMUST00000175233 235 ntBASIC21.18■□□□□ 0.98
Cux2P70298 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cux2P70298 Gm19166-201ENSMUST00000196041 1063 ntBASIC21.18■□□□□ 0.98
Cux2P70298 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC21.18■□□□□ 0.98
Cux2P70298 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Snora73b-201ENSMUST00000083419 205 ntBASIC21.18■□□□□ 0.98
Cux2P70298 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC21.18■□□□□ 0.98
Cux2P70298 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cux2P70298 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC21.17■□□□□ 0.98
Cux2P70298 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 AC123619.2-202ENSMUST00000225097 1568 ntBASIC21.17■□□□□ 0.98
Cux2P70298 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cux2P70298 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC21.17■□□□□ 0.98
Cux2P70298 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 AC129219.2-201ENSMUST00000224324 701 ntBASIC21.17■□□□□ 0.98
Cux2P70298 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC21.17■□□□□ 0.98
Cux2P70298 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cux2P70298 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cux2P70298 Gm12620-201ENSMUST00000119791 1986 ntBASIC21.16■□□□□ 0.98
Cux2P70298 Gm12612-201ENSMUST00000140182 1986 ntBASIC21.16■□□□□ 0.98
Cux2P70298 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cux2P70298 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Gm15573-201ENSMUST00000119487 540 ntBASIC21.16■□□□□ 0.98
Cux2P70298 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC21.16■□□□□ 0.98
Cux2P70298 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC21.16■□□□□ 0.98
Cux2P70298 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC21.16■□□□□ 0.98
Cux2P70298 Gm9132-201ENSMUST00000210182 832 ntBASIC21.16■□□□□ 0.98
Cux2P70298 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cux2P70298 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cux2P70298 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms