Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.39□□□□□ -0.43
Six5P70178 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Gm11918-201ENSMUST00000121660 179 ntBASIC12.39□□□□□ -0.43
Six5P70178 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Six5P70178 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.39□□□□□ -0.43
Six5P70178 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.39□□□□□ -0.43
Six5P70178 Gm6745-201ENSMUST00000199216 526 ntBASIC12.39□□□□□ -0.43
Six5P70178 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.39□□□□□ -0.43
Six5P70178 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.39□□□□□ -0.43
Six5P70178 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.39□□□□□ -0.43
Six5P70178 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.39□□□□□ -0.43
Six5P70178 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.38□□□□□ -0.43
Six5P70178 Gm6447-201ENSMUST00000118905 835 ntBASIC12.38□□□□□ -0.43
Six5P70178 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Gm45384-201ENSMUST00000210451 277 ntBASIC12.38□□□□□ -0.43
Six5P70178 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Gm9908-201ENSMUST00000211534 448 ntBASIC12.38□□□□□ -0.43
Six5P70178 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.38□□□□□ -0.43
Six5P70178 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Six5P70178 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Six5P70178 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six5P70178 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.37□□□□□ -0.43
Six5P70178 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.37□□□□□ -0.43
Six5P70178 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Six5P70178 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.37□□□□□ -0.43
Six5P70178 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Six5P70178 Gm19931-201ENSMUST00000198920 368 ntBASIC12.37□□□□□ -0.43
Six5P70178 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.37□□□□□ -0.43
Six5P70178 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Six5P70178 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six5P70178 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms