Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Gm19931-201ENSMUST00000198920 368 ntBASIC12.98□□□□□ -0.33
Lhx1P63006 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.98□□□□□ -0.33
Lhx1P63006 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Lhx1P63006 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.97□□□□□ -0.33
Lhx1P63006 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Gm5370-201ENSMUST00000187187 574 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Gm37424-201ENSMUST00000191727 561 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.97□□□□□ -0.33
Lhx1P63006 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.97□□□□□ -0.33
Lhx1P63006 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.97□□□□□ -0.33
Lhx1P63006 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Lhx1P63006 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.97□□□□□ -0.33
Lhx1P63006 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lhx1P63006 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lhx1P63006 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx1P63006 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.96□□□□□ -0.33
Lhx1P63006 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Gm26185-201ENSMUST00000157692 266 ntBASIC12.96□□□□□ -0.33
Lhx1P63006 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.96□□□□□ -0.33
Lhx1P63006 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.96□□□□□ -0.33
Lhx1P63006 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lhx1P63006 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx1P63006 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx1P63006 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx1P63006 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx1P63006 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx1P63006 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx1P63006 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lhx1P63006 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Lhx1P63006 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms