Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Gm5566-201ENSMUST00000116118 459 ntBASIC9.41□□□□□ -0.9
Rpl39P62892 Gm18766-201ENSMUST00000189811 808 ntBASIC9.41□□□□□ -0.9
Rpl39P62892 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.41□□□□□ -0.9
Rpl39P62892 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.41□□□□□ -0.9
Rpl39P62892 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Rpl39P62892 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39P62892 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.41□□□□□ -0.9
Rpl39P62892 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39P62892 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.4□□□□□ -0.9
Rpl39P62892 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Rpl39P62892 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.4□□□□□ -0.9
Rpl39P62892 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.4□□□□□ -0.9
Rpl39P62892 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Rpl39P62892 Gm13385-201ENSMUST00000121089 220 ntBASIC9.4□□□□□ -0.9
Rpl39P62892 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Gm9824-201ENSMUST00000178707 561 ntBASIC9.4□□□□□ -0.9
Rpl39P62892 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Rpl39P62892 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC9.4□□□□□ -0.9
Rpl39P62892 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.4□□□□□ -0.9
Rpl39P62892 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.4□□□□□ -0.9
Rpl39P62892 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.4□□□□□ -0.9
Rpl39P62892 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.4□□□□□ -0.9
Rpl39P62892 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rpl39P62892 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39P62892 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms