Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm3P62311 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.02□□□□□ -0.49
Lsm3P62311 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lsm3P62311 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm3P62311 Gm14859-201ENSMUST00000117752 357 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.01□□□□□ -0.49
Lsm3P62311 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Gm37714-201ENSMUST00000194742 342 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm3P62311 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.01□□□□□ -0.49
Lsm3P62311 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm3P62311 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Lsm3P62311 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Lsm3P62311 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm3P62311 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 BC001981-202ENSMUST00000191393 1545 ntBASIC12.01□□□□□ -0.49
Lsm3P62311 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm3P62311 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Mir698-201ENSMUST00000102164 109 ntBASIC12□□□□□ -0.49
Lsm3P62311 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Gm13823-201ENSMUST00000119930 345 ntBASIC12□□□□□ -0.49
Lsm3P62311 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12□□□□□ -0.49
Lsm3P62311 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12□□□□□ -0.49
Lsm3P62311 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 AC132467.2-202ENSMUST00000227726 559 ntBASIC12□□□□□ -0.49
Lsm3P62311 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lsm3P62311 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Lsm3P62311 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12□□□□□ -0.49
Lsm3P62311 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Lsm3P62311 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms