Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.67□□□□□ -0.54
Sec61a1P61620 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sec61a1P61620 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.67□□□□□ -0.54
Sec61a1P61620 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.67□□□□□ -0.54
Sec61a1P61620 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.67□□□□□ -0.54
Sec61a1P61620 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.67□□□□□ -0.54
Sec61a1P61620 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.66□□□□□ -0.54
Sec61a1P61620 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm7488-201ENSMUST00000117148 684 ntBASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm15460-201ENSMUST00000118147 391 ntBASIC11.66□□□□□ -0.54
Sec61a1P61620 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.66□□□□□ -0.54
Sec61a1P61620 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a1P61620 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a1P61620 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Sec61a1P61620 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.65□□□□□ -0.54
Sec61a1P61620 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Sec61a1P61620 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Sec61a1P61620 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.65□□□□□ -0.54
Sec61a1P61620 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.65□□□□□ -0.54
Sec61a1P61620 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms