Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smg6P61406 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Smg6P61406 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.16■□□□□ 0.5
Smg6P61406 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.16■□□□□ 0.5
Smg6P61406 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Gm6091-201ENSMUST00000098307 165 ntBASIC18.16■□□□□ 0.5
Smg6P61406 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smg6P61406 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smg6P61406 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Smg6P61406 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg6P61406 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smg6P61406 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Smg6P61406 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Gm8213-201ENSMUST00000118191 441 ntBASIC18.15■□□□□ 0.5
Smg6P61406 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.15■□□□□ 0.5
Smg6P61406 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.15■□□□□ 0.5
Smg6P61406 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.15■□□□□ 0.5
Smg6P61406 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smg6P61406 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smg6P61406 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC18.15■□□□□ 0.5
Smg6P61406 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smg6P61406 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Gm8810-201ENSMUST00000172895 754 ntBASIC18.15■□□□□ 0.5
Smg6P61406 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.15■□□□□ 0.5
Smg6P61406 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Gm43179-201ENSMUST00000198797 275 ntBASIC18.15■□□□□ 0.5
Smg6P61406 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.15■□□□□ 0.5
Smg6P61406 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.15■□□□□ 0.5
Smg6P61406 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.15■□□□□ 0.5
Smg6P61406 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.15■□□□□ 0.5
Smg6P61406 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg6P61406 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Smg6P61406 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Smg6P61406 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smg6P61406 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smg6P61406 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Smg6P61406 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smg6P61406 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.14■□□□□ 0.49
Smg6P61406 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Smg6P61406 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smg6P61406 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.14■□□□□ 0.49
Smg6P61406 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smg6P61406 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Gm24644-201ENSMUST00000157114 139 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smg6P61406 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smg6P61406 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Gm38671-201ENSMUST00000200573 130 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.14■□□□□ 0.49
Smg6P61406 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.14■□□□□ 0.49
Smg6P61406 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.14■□□□□ 0.49
Smg6P61406 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smg6P61406 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms