Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Gm15693-201ENSMUST00000120470 637 ntBASIC11.75□□□□□ -0.53
Sf3b6P59708 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sf3b6P59708 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.75□□□□□ -0.53
Sf3b6P59708 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3b6P59708 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.74□□□□□ -0.53
Sf3b6P59708 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.74□□□□□ -0.53
Sf3b6P59708 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.74□□□□□ -0.53
Sf3b6P59708 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.74□□□□□ -0.53
Sf3b6P59708 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sf3b6P59708 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.74□□□□□ -0.53
Sf3b6P59708 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.74□□□□□ -0.53
Sf3b6P59708 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.74□□□□□ -0.53
Sf3b6P59708 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3b6P59708 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms