Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.52□□□□□ -0.25
Tubgcp3P58854 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.52□□□□□ -0.25
Tubgcp3P58854 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubgcp3P58854 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.51□□□□□ -0.25
Tubgcp3P58854 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm12341-201ENSMUST00000119724 503 ntBASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.51□□□□□ -0.25
Tubgcp3P58854 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tubgcp3P58854 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.5□□□□□ -0.25
Tubgcp3P58854 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.5□□□□□ -0.25
Tubgcp3P58854 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Gm13689-201ENSMUST00000119360 685 ntBASIC13.5□□□□□ -0.25
Tubgcp3P58854 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Mir7221-201ENSMUST00000184009 72 ntBASIC13.5□□□□□ -0.25
Tubgcp3P58854 Gm38223-201ENSMUST00000194484 695 ntBASIC13.5□□□□□ -0.25
Tubgcp3P58854 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubgcp3P58854 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubgcp3P58854 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubgcp3P58854 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubgcp3P58854 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubgcp3P58854 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms