Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Tpm1P58771 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.74□□□□□ -0.05
Tpm1P58771 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tpm1P58771 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.74□□□□□ -0.05
Tpm1P58771 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tpm1P58771 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Tpm1P58771 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tpm1P58771 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Tpm1P58771 Gm15393-201ENSMUST00000120499 219 ntBASIC14.74□□□□□ -0.05
Tpm1P58771 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Tpm1P58771 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Tpm1P58771 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.74□□□□□ -0.05
Tpm1P58771 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Tpm1P58771 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.74□□□□□ -0.05
Tpm1P58771 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.74□□□□□ -0.05
Tpm1P58771 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tpm1P58771 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm1P58771 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.73□□□□□ -0.05
Tpm1P58771 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.73□□□□□ -0.05
Tpm1P58771 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.73□□□□□ -0.05
Tpm1P58771 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Tpm1P58771 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Tpm1P58771 Gm9229-201ENSMUST00000222777 126 ntBASIC14.73□□□□□ -0.05
Tpm1P58771 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.73□□□□□ -0.05
Tpm1P58771 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Tpm1P58771 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tpm1P58771 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.72□□□□□ -0.05
Tpm1P58771 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Tpm1P58771 Mir1897-201ENSMUST00000122581 272 ntBASIC14.72□□□□□ -0.05
Tpm1P58771 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.72□□□□□ -0.05
Tpm1P58771 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm5264-201ENSMUST00000190584 848 ntBASIC14.72□□□□□ -0.05
Tpm1P58771 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.72□□□□□ -0.05
Tpm1P58771 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Tpm1P58771 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Tpm1P58771 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Tpm1P58771 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.72□□□□□ -0.05
Tpm1P58771 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tpm1P58771 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms