Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SmoP56726 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.28□□□□□ -0.28
SmoP56726 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SmoP56726 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Mir874-201ENSMUST00000104769 76 ntBASIC13.28□□□□□ -0.28
SmoP56726 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.28□□□□□ -0.28
SmoP56726 Gm27514-201ENSMUST00000183692 110 ntBASIC13.28□□□□□ -0.28
SmoP56726 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.28□□□□□ -0.28
SmoP56726 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SmoP56726 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.28□□□□□ -0.28
SmoP56726 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SmoP56726 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.28□□□□□ -0.28
SmoP56726 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SmoP56726 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SmoP56726 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SmoP56726 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SmoP56726 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.27□□□□□ -0.28
SmoP56726 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
SmoP56726 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
SmoP56726 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SmoP56726 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SmoP56726 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SmoP56726 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.27□□□□□ -0.28
SmoP56726 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
SmoP56726 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Gm11637-201ENSMUST00000120601 592 ntBASIC13.27□□□□□ -0.29
SmoP56726 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.27□□□□□ -0.29
SmoP56726 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Gm6458-201ENSMUST00000211573 635 ntBASIC13.27□□□□□ -0.29
SmoP56726 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.27□□□□□ -0.29
SmoP56726 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.27□□□□□ -0.29
SmoP56726 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.27□□□□□ -0.29
SmoP56726 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.27□□□□□ -0.29
SmoP56726 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.27□□□□□ -0.29
SmoP56726 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SmoP56726 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.27□□□□□ -0.29
SmoP56726 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SmoP56726 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
SmoP56726 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.27□□□□□ -0.29
SmoP56726 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SmoP56726 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SmoP56726 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SmoP56726 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.26□□□□□ -0.29
SmoP56726 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Gm8062-201ENSMUST00000139696 444 ntBASIC13.26□□□□□ -0.29
SmoP56726 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.26□□□□□ -0.29
SmoP56726 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SmoP56726 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.26□□□□□ -0.29
SmoP56726 Gm43630-201ENSMUST00000201550 776 ntBASIC13.26□□□□□ -0.29
SmoP56726 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.26□□□□□ -0.29
SmoP56726 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SmoP56726 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.26□□□□□ -0.29
SmoP56726 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms