Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdkn2bP55271 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Gm14701-201ENSMUST00000117156 348 ntBASIC12.67□□□□□ -0.38
Cdkn2bP55271 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.67□□□□□ -0.38
Cdkn2bP55271 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.67□□□□□ -0.38
Cdkn2bP55271 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.67□□□□□ -0.38
Cdkn2bP55271 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.67□□□□□ -0.38
Cdkn2bP55271 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdkn2bP55271 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm15376-201ENSMUST00000122258 783 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm26464-201ENSMUST00000157094 305 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm26308-201ENSMUST00000157768 69 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm43094-201ENSMUST00000196549 921 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.66□□□□□ -0.38
Cdkn2bP55271 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn2bP55271 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.65□□□□□ -0.38
Cdkn2bP55271 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm23935-201ENSMUST00000102303 57 ntBASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm24270-201ENSMUST00000102326 57 ntBASIC12.65□□□□□ -0.38
Cdkn2bP55271 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm24245-201ENSMUST00000157318 57 ntBASIC12.65□□□□□ -0.38
Cdkn2bP55271 Gm6736-201ENSMUST00000166583 948 ntBASIC12.65□□□□□ -0.38
Cdkn2bP55271 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn2bP55271 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms