Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.26□□□□□ -0.13
Nub1P54729 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.26□□□□□ -0.13
Nub1P54729 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nub1P54729 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.26□□□□□ -0.13
Nub1P54729 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.26□□□□□ -0.13
Nub1P54729 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Gm7653-201ENSMUST00000214567 508 ntBASIC14.26□□□□□ -0.13
Nub1P54729 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.26□□□□□ -0.13
Nub1P54729 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.26□□□□□ -0.13
Nub1P54729 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Nub1P54729 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.26□□□□□ -0.13
Nub1P54729 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.26□□□□□ -0.13
Nub1P54729 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nub1P54729 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nub1P54729 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Nub1P54729 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.25□□□□□ -0.13
Nub1P54729 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.25□□□□□ -0.13
Nub1P54729 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Nub1P54729 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.25□□□□□ -0.13
Nub1P54729 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.25□□□□□ -0.13
Nub1P54729 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Nub1P54729 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.25□□□□□ -0.13
Nub1P54729 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.25□□□□□ -0.13
Nub1P54729 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.25□□□□□ -0.13
Nub1P54729 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nub1P54729 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.25□□□□□ -0.13
Nub1P54729 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nub1P54729 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nub1P54729 Gm5687-201ENSMUST00000118252 640 ntBASIC14.24□□□□□ -0.13
Nub1P54729 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.24□□□□□ -0.13
Nub1P54729 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.24□□□□□ -0.13
Nub1P54729 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nub1P54729 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nub1P54729 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.24□□□□□ -0.13
Nub1P54729 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nub1P54729 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms