Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.63■□□□□ 0.25
Msh6P54276 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.63■□□□□ 0.25
Msh6P54276 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.63■□□□□ 0.25
Msh6P54276 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.63■□□□□ 0.25
Msh6P54276 Mir5120-201ENSMUST00000175020 78 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Gm38317-201ENSMUST00000195564 343 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Gm13097-201ENSMUST00000210722 397 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Gm6458-201ENSMUST00000211573 635 ntBASIC16.63■□□□□ 0.25
Msh6P54276 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.62■□□□□ 0.25
Msh6P54276 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Msh6P54276 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Msh6P54276 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.62■□□□□ 0.25
Msh6P54276 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.62■□□□□ 0.25
Msh6P54276 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.62■□□□□ 0.25
Msh6P54276 Gm37986-201ENSMUST00000193285 383 ntBASIC16.62■□□□□ 0.25
Msh6P54276 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.62■□□□□ 0.25
Msh6P54276 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.62■□□□□ 0.25
Msh6P54276 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh6P54276 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.61■□□□□ 0.25
Msh6P54276 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Msh6P54276 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.61■□□□□ 0.25
Msh6P54276 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Msh6P54276 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Msh6P54276 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.61■□□□□ 0.25
Msh6P54276 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.61■□□□□ 0.25
Msh6P54276 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.61■□□□□ 0.25
Msh6P54276 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.61■□□□□ 0.25
Msh6P54276 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.61■□□□□ 0.25
Msh6P54276 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.61■□□□□ 0.25
Msh6P54276 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.61■□□□□ 0.25
Msh6P54276 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh6P54276 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.6■□□□□ 0.25
Msh6P54276 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms