Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.23□□□□□ -0.29
Fdft1P53798 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.23□□□□□ -0.29
Fdft1P53798 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.23□□□□□ -0.29
Fdft1P53798 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Fdft1P53798 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Fdft1P53798 Gm44855-201ENSMUST00000205725 362 ntBASIC13.23□□□□□ -0.29
Fdft1P53798 Gm6218-201ENSMUST00000219812 628 ntBASIC13.23□□□□□ -0.29
Fdft1P53798 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Fdft1P53798 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fdft1P53798 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.23□□□□□ -0.29
Fdft1P53798 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
Fdft1P53798 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.23□□□□□ -0.29
Fdft1P53798 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.22□□□□□ -0.29
Fdft1P53798 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Auts2-212ENSMUST00000178555 309 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Gm10576-201ENSMUST00000191927 825 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.22□□□□□ -0.29
Fdft1P53798 Gm19078-201ENSMUST00000206311 727 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.22□□□□□ -0.29
Fdft1P53798 Gm7730-201ENSMUST00000212486 454 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.22□□□□□ -0.29
Fdft1P53798 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Fdft1P53798 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Fdft1P53798 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Fdft1P53798 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Fdft1P53798 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fdft1P53798 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.21□□□□□ -0.29
Fdft1P53798 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm11524-201ENSMUST00000119349 807 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Gm15376-201ENSMUST00000122258 783 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Fdft1P53798 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.21□□□□□ -0.29
Fdft1P53798 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.21□□□□□ -0.29
Fdft1P53798 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.21□□□□□ -0.29
Fdft1P53798 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm5161-201ENSMUST00000075243 853 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Gm24447-201ENSMUST00000083977 338 ntBASIC13.21□□□□□ -0.29
Fdft1P53798 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fdft1P53798 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Fdft1P53798 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms